im not sure on the ac but as far as i know your computer will normally have to run both the motor and tranny. so you cant use your 94 pcm for the motor/trans. so you will have to use the new pcm and it will have to be programmed for it. is this the stock tranny or did you buy it because im pretty sure the 60e started in 95.... if its your stock trans, i would make sure its a 60e. if not then, your new pcm wont be able to control it.